CAPS Analysis: A Possible Tool to Detect and Group Geminiviruses Infecting Some Fibre Crops and Weeds

Fig. 5. Cladogram illustrating phylogenetic relationships based on CAPS analysis of different DNA β (drawn by SHAN clustering UPGMA method using Jaccard coefficient in NTSYS PC 2.02e software). The begomoviruses isolated from the hosts are: (A) Croton bonplandianum; (B) Sida acuminata; (C) S. rhomboidifolia; (D) Ageratum conyzoides; (E) Lycopersicon esculentum; (F) Abelmoschus esculentus; (G) Urena lobata; (H) Hibiscus cannabinus; and (I) H. sabdariffa.



Image from Plant Health Progress article:
CAPS Analysis: A Possible Tool to Detect and Group Geminiviruses Infecting Some Fibre Crops and Weeds