Table 2 in:


Ganiger, M., Walker, D. R., and Chen, Z. Y. 2013. Proteomics based study of soybean and Phakopsora pachyrhizi interaction. Online. Plant Health Progress doi:10.1094/PHP-2013-1125-01-RS.



Table 2. Protein identifications and properties of spots differentially expressed in resistant line (10G18) and susceptible line (10G21) in response to Phakopsora pachyrhizi inoculation.

S. No. Spot IDt Putative protein NCBI accession number Time point Fold changeu No. of matching peptidesv Peptide Sequencew Mascot scorex % Sequence coveragey pIz MW (Da)z
1 0748 Uncharacterized protein LOC100499761 NP_

001235654

All the time points 1.2 3 gkDIVELIAagrlatvpsgg
ggaVaaaPGggaAAAAPa
aeaklatvPsggggavavaa
aPggGaaaaAPaaeakk
132 39 4.36 11439
2 0705 Ribulose bisphosphate carboxylase small chain 1, chloroplastic, precursor P00865

5
days
1.1 2 iIGFDNvR

taYPNGfiR

68 9 8.87 20060
3 0748,

0777,
0004

Uncharacterized protein LOC100499761 NP_

001235654

All the time points 1.2 3 gkDIVELIAagrlatvpsgg
ggaVaaaPGggaAAAAPa
aeaklatvPsggggavavaa
aPggGaaaaAPaaeakk
132 39 4.36 11439
4 0613 Probable fructose-bisphosphate aldolase 2, chloroplastic-like, predicted XP_

003537836

12 days 1.3 9 eAAWGLaR
     
aAQDALLFR
aGSYADElVk
saAYYqQGar
aSPqTVADYTLK
laSIGLENTEANR
tvVSIPNGPSaLAVK
dkASPQTVADYTLK
rlasiGlENTEANr
580 20 8.24 42925

 t Spot identification number (Figs. 1 and 3).

 u Ratios represent fold change relative to susceptible line (10G21).

 v Number of identified unique peptides by Mascot MS/MS ion search.

 w lower case letters indicate no confidence based on Mascot MS/MS ion search.

 x Obtained from Mascot.

 y The values indicate the percentage of sequence coverage of identified peptides.

 z Theoretical values.








© 2013 Plant Management Network.